Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 AL022342.1-201ENST00000400363 863 ntBASIC12.72□□□□□ -0.37
HIST1H1DP16402 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 TMEM198B-204ENST00000484016 896 ntBASIC12.72□□□□□ -0.37
HIST1H1DP16402 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 AC044860.1-202ENST00000559481 777 ntBASIC12.72□□□□□ -0.37
HIST1H1DP16402 AC092337.1-201ENST00000568699 1129 ntBASIC12.72□□□□□ -0.37
HIST1H1DP16402 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 ZNF890P-202ENST00000530367 1156 ntBASIC12.71□□□□□ -0.37
HIST1H1DP16402 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 MIR3687-2-201ENST00000577708 61 ntBASIC12.71□□□□□ -0.37
HIST1H1DP16402 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 MIR3687-1-201ENST00000614492 61 ntBASIC12.71□□□□□ -0.37
HIST1H1DP16402 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1DP16402 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HIST1H1DP16402 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H1DP16402 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.71□□□□□ -0.38
HIST1H1DP16402 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H1DP16402 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.71□□□□□ -0.38
HIST1H1DP16402 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H1DP16402 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H1DP16402 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H1DP16402 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms