Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 AC011481.3-201ENST00000623895 5594 ntBASIC11.23□□□□□ -0.61
SMIM17P0DL12 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.23□□□□□ -0.61
SMIM17P0DL12 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 AC145285.3-201ENST00000564603 959 ntBASIC11.23□□□□□ -0.61
SMIM17P0DL12 AC106730.1-201ENST00000566722 1090 ntBASIC11.23□□□□□ -0.61
SMIM17P0DL12 AC091812.2-201ENST00000619081 385 ntBASIC11.23□□□□□ -0.61
SMIM17P0DL12 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 AZGP1P1-201ENST00000411909 902 ntBASIC11.22□□□□□ -0.61
SMIM17P0DL12 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 GHSR-202ENST00000427970 912 ntBASIC11.22□□□□□ -0.61
SMIM17P0DL12 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 AL591424.1-201ENST00000442569 1213 ntBASIC11.22□□□□□ -0.61
SMIM17P0DL12 KRT18P2-201ENST00000447938 1258 ntBASIC11.22□□□□□ -0.61
SMIM17P0DL12 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 AC026120.1-201ENST00000611536 926 ntBASIC11.22□□□□□ -0.61
SMIM17P0DL12 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms