Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGN1P05114 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.61□□□□□ -0.23
HMGN1P05114 NUS1P3-201ENST00000423502 862 ntBASIC13.61□□□□□ -0.23
HMGN1P05114 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGN1P05114 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGN1P05114 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.61□□□□□ -0.23
HMGN1P05114 AL353779.1-201ENST00000434793 351 ntBASIC13.61□□□□□ -0.23
HMGN1P05114 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.61□□□□□ -0.23
HMGN1P05114 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HMGN1P05114 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.61□□□□□ -0.23
HMGN1P05114 AC044860.1-202ENST00000559481 777 ntBASIC13.61□□□□□ -0.23
HMGN1P05114 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGN1P05114 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HMGN1P05114 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGN1P05114 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN1P05114 AL158070.2-201ENST00000623713 1621 ntBASIC13.61□□□□□ -0.23
HMGN1P05114 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
HMGN1P05114 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.6□□□□□ -0.23
HMGN1P05114 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HMGN1P05114 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HMGN1P05114 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
HMGN1P05114 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.6□□□□□ -0.23
HMGN1P05114 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HMGN1P05114 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.6□□□□□ -0.23
HMGN1P05114 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 MEIS3P1-201ENST00000495167 958 ntBASIC13.6□□□□□ -0.23
HMGN1P05114 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.6□□□□□ -0.23
HMGN1P05114 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.6□□□□□ -0.23
HMGN1P05114 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HMGN1P05114 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HMGN1P05114 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HMGN1P05114 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HMGN1P05114 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.6□□□□□ -0.23
HMGN1P05114 AL596442.2-201ENST00000610240 980 ntBASIC13.6□□□□□ -0.23
HMGN1P05114 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.6□□□□□ -0.23
HMGN1P05114 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HMGN1P05114 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HMGN1P05114 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
HMGN1P05114 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HMGN1P05114 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.6□□□□□ -0.23
HMGN1P05114 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HMGN1P05114 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.6□□□□□ -0.23
HMGN1P05114 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN1P05114 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
HMGN1P05114 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGN1P05114 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
HMGN1P05114 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGN1P05114 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGN1P05114 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
HMGN1P05114 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HMGN1P05114 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGN1P05114 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.59□□□□□ -0.23
HMGN1P05114 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGN1P05114 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.59□□□□□ -0.23
HMGN1P05114 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGN1P05114 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGN1P05114 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms