Protein–RNA interactions for Protein: O95573

ACSL3, Long-chain-fatty-acid--CoA ligase 3, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3O95573 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL3O95573 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.35■□□□□ 0.05
ACSL3O95573 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.35■□□□□ 0.05
ACSL3O95573 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ACSL3O95573 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL3O95573 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL3O95573 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.35■□□□□ 0.05
ACSL3O95573 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.35■□□□□ 0.05
ACSL3O95573 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL3O95573 AC023141.5-201ENST00000458585 616 ntBASIC15.35■□□□□ 0.05
ACSL3O95573 RN7SL618P-201ENST00000477850 296 ntBASIC15.35■□□□□ 0.05
ACSL3O95573 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.35■□□□□ 0.05
ACSL3O95573 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.35■□□□□ 0.05
ACSL3O95573 AC010336.2-201ENST00000564226 506 ntBASIC15.35■□□□□ 0.05
ACSL3O95573 AC051619.7-201ENST00000568314 623 ntBASIC15.35■□□□□ 0.05
ACSL3O95573 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.35■□□□□ 0.05
ACSL3O95573 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL3O95573 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL3O95573 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL3O95573 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.35■□□□□ 0.05
ACSL3O95573 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.35■□□□□ 0.05
ACSL3O95573 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL3O95573 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ACSL3O95573 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL3O95573 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL3O95573 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL3O95573 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
ACSL3O95573 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.35■□□□□ 0.05
ACSL3O95573 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL3O95573 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ACSL3O95573 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ACSL3O95573 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.35■□□□□ 0.05
ACSL3O95573 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.35■□□□□ 0.05
ACSL3O95573 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 AC105206.1-202ENST00000314927 2368 ntBASIC15.34■□□□□ 0.05
ACSL3O95573 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
ACSL3O95573 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ACSL3O95573 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 AC090505.1-201ENST00000430515 1834 ntBASIC15.34■□□□□ 0.05
ACSL3O95573 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.34■□□□□ 0.05
ACSL3O95573 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ACSL3O95573 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ACSL3O95573 CICP20-201ENST00000443330 2801 ntBASIC15.34■□□□□ 0.05
ACSL3O95573 CICP16-201ENST00000502609 2813 ntBASIC15.34■□□□□ 0.05
ACSL3O95573 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 HLA-K-203ENST00000430151 1046 ntBASIC15.34■□□□□ 0.05
ACSL3O95573 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.34■□□□□ 0.05
ACSL3O95573 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.34■□□□□ 0.05
ACSL3O95573 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.34■□□□□ 0.05
ACSL3O95573 YBX1P5-201ENST00000509441 847 ntBASIC15.34■□□□□ 0.05
ACSL3O95573 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.34■□□□□ 0.05
ACSL3O95573 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.34■□□□□ 0.05
ACSL3O95573 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.34■□□□□ 0.05
ACSL3O95573 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.34■□□□□ 0.05
ACSL3O95573 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
ACSL3O95573 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.34■□□□□ 0.05
ACSL3O95573 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 AP001059.3-201ENST00000619053 235 ntBASIC15.34■□□□□ 0.05
ACSL3O95573 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ACSL3O95573 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.34■□□□□ 0.05
ACSL3O95573 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ACSL3O95573 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ACSL3O95573 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.34■□□□□ 0.05
ACSL3O95573 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ACSL3O95573 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.34■□□□□ 0.05
ACSL3O95573 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.34■□□□□ 0.05
ACSL3O95573 KRT8P22-201ENST00000562317 1415 ntBASIC15.34■□□□□ 0.05
ACSL3O95573 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.34■□□□□ 0.05
ACSL3O95573 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL3O95573 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ACSL3O95573 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
ACSL3O95573 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.33■□□□□ 0.05
ACSL3O95573 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ACSL3O95573 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.33■□□□□ 0.05
ACSL3O95573 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
ACSL3O95573 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
ACSL3O95573 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.33■□□□□ 0.05
ACSL3O95573 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ACSL3O95573 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms