Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.07■□□□□ 0
GPC4O75487 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
GPC4O75487 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.07■□□□□ 0
GPC4O75487 C1QBPP1-201ENST00000400117 770 ntBASIC15.07■□□□□ 0
GPC4O75487 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.07■□□□□ 0
GPC4O75487 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.07■□□□□ 0
GPC4O75487 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.07■□□□□ 0
GPC4O75487 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.07■□□□□ 0
GPC4O75487 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.07■□□□□ 0
GPC4O75487 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.07■□□□□ 0
GPC4O75487 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
GPC4O75487 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
GPC4O75487 AC133539.2-201ENST00000604757 467 ntBASIC15.07■□□□□ 0
GPC4O75487 WFDC1-204ENST00000613603 549 ntBASIC15.07■□□□□ 0
GPC4O75487 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
GPC4O75487 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.07■□□□□ 0
GPC4O75487 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.07■□□□□ 0
GPC4O75487 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 REXO1L2P-201ENST00000425429 2069 ntBASIC15.07■□□□□ 0
GPC4O75487 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
GPC4O75487 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.07■□□□□ 0
GPC4O75487 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.06■□□□□ 0
GPC4O75487 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GPC4O75487 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.06■□□□□ 0
GPC4O75487 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.06■□□□□ 0
GPC4O75487 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
GPC4O75487 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.06■□□□□ 0
GPC4O75487 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
GPC4O75487 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.06■□□□□ 0
GPC4O75487 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.06■□□□□ 0
GPC4O75487 AL645937.2-201ENST00000396808 931 ntBASIC15.06■□□□□ 0
GPC4O75487 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.06■□□□□ 0
GPC4O75487 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
GPC4O75487 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.06■□□□□ 0
GPC4O75487 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GPC4O75487 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.06■□□□□ 0
GPC4O75487 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.06■□□□□ 0
GPC4O75487 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.06■□□□□ 0
GPC4O75487 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.06■□□□□ 0
GPC4O75487 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.06■□□□□ 0
GPC4O75487 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
GPC4O75487 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.06■□□□□ 0
GPC4O75487 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GPC4O75487 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.06■□□□□ 0
GPC4O75487 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
GPC4O75487 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
GPC4O75487 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
GPC4O75487 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.06■□□□□ 0
GPC4O75487 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
GPC4O75487 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.06■□□□□ 0
GPC4O75487 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GPC4O75487 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms