Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.96□□□□□ -0.01
SHOX2O60902 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.96□□□□□ -0.01
SHOX2O60902 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SHOX2O60902 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.96□□□□□ -0.01
SHOX2O60902 AL391647.1-201ENST00000395664 511 ntBASIC14.96□□□□□ -0.01
SHOX2O60902 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SHOX2O60902 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.96□□□□□ -0.01
SHOX2O60902 HCG4B-203ENST00000450128 991 ntBASIC14.96□□□□□ -0.01
SHOX2O60902 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.96□□□□□ -0.01
SHOX2O60902 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.96□□□□□ -0.01
SHOX2O60902 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.96□□□□□ -0.01
SHOX2O60902 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.96□□□□□ -0.01
SHOX2O60902 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.96□□□□□ -0.01
SHOX2O60902 RN7SL510P-201ENST00000581311 263 ntBASIC14.96□□□□□ -0.01
SHOX2O60902 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.96□□□□□ -0.01
SHOX2O60902 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.96□□□□□ -0.01
SHOX2O60902 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.96□□□□□ -0.01
SHOX2O60902 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.96□□□□□ -0.01
SHOX2O60902 AL773604.1-201ENST00000617417 272 ntBASIC14.96□□□□□ -0.01
SHOX2O60902 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.96□□□□□ -0.01
SHOX2O60902 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SHOX2O60902 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.96□□□□□ -0.01
SHOX2O60902 AC010970.1-201ENST00000445125 1848 ntBASIC14.96□□□□□ -0.01
SHOX2O60902 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHOX2O60902 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHOX2O60902 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.96□□□□□ -0.02
SHOX2O60902 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SHOX2O60902 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHOX2O60902 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHOX2O60902 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHOX2O60902 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.96□□□□□ -0.02
SHOX2O60902 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHOX2O60902 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SHOX2O60902 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 AC110048.1-201ENST00000604293 2157 ntBASIC14.95□□□□□ -0.02
SHOX2O60902 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SHOX2O60902 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.95□□□□□ -0.02
SHOX2O60902 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.95□□□□□ -0.02
SHOX2O60902 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SHOX2O60902 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.95□□□□□ -0.02
SHOX2O60902 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.95□□□□□ -0.02
SHOX2O60902 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHOX2O60902 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHOX2O60902 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHOX2O60902 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.95□□□□□ -0.02
SHOX2O60902 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.95□□□□□ -0.02
SHOX2O60902 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SHOX2O60902 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.95□□□□□ -0.02
SHOX2O60902 RNA5SP415-201ENST00000517246 115 ntBASIC14.95□□□□□ -0.02
SHOX2O60902 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.95□□□□□ -0.02
SHOX2O60902 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.95□□□□□ -0.02
SHOX2O60902 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.95□□□□□ -0.02
SHOX2O60902 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
SHOX2O60902 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SHOX2O60902 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHOX2O60902 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.95□□□□□ -0.02
SHOX2O60902 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SHOX2O60902 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHOX2O60902 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHOX2O60902 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.95□□□□□ -0.02
SHOX2O60902 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHOX2O60902 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.94□□□□□ -0.02
SHOX2O60902 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SHOX2O60902 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.94□□□□□ -0.02
SHOX2O60902 AC009474.1-201ENST00000455096 1565 ntBASIC14.94□□□□□ -0.02
SHOX2O60902 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.94□□□□□ -0.02
SHOX2O60902 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHOX2O60902 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHOX2O60902 KRT8P14-201ENST00000414254 1442 ntBASIC14.94□□□□□ -0.02
SHOX2O60902 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms