Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN5O00501 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDN5O00501 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLDN5O00501 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 AC007686.3-201ENST00000619017 3487 ntBASIC15.71■□□□□ 0.11
CLDN5O00501 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLDN5O00501 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CLDN5O00501 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN5O00501 AL354877.1-201ENST00000424412 413 ntBASIC15.71■□□□□ 0.11
CLDN5O00501 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN5O00501 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN5O00501 AC243960.2-201ENST00000600996 747 ntBASIC15.71■□□□□ 0.11
CLDN5O00501 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CLDN5O00501 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN5O00501 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLDN5O00501 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN5O00501 AL136172.1-201ENST00000598590 1394 ntBASIC15.71■□□□□ 0.11
CLDN5O00501 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDN5O00501 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN5O00501 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN5O00501 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN5O00501 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN5O00501 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLDN5O00501 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLDN5O00501 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLDN5O00501 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
CLDN5O00501 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CLDN5O00501 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLDN5O00501 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
CLDN5O00501 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN5O00501 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLDN5O00501 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.7■□□□□ 0.1
CLDN5O00501 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN5O00501 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.7■□□□□ 0.1
CLDN5O00501 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN5O00501 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.7■□□□□ 0.1
CLDN5O00501 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN5O00501 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN5O00501 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 BX088702.1-201ENST00000610784 235 ntBASIC15.7■□□□□ 0.1
CLDN5O00501 AL008638.5-201ENST00000623814 1298 ntBASIC15.7■□□□□ 0.1
CLDN5O00501 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN5O00501 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN5O00501 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN5O00501 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN5O00501 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLDN5O00501 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN5O00501 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLDN5O00501 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms