Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SBNO1A3KN83 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SBNO1A3KN83 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SBNO1A3KN83 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SBNO1A3KN83 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SBNO1A3KN83 AQP7P5-201ENST00000428759 1049 ntBASIC19.82■□□□□ 0.76
SBNO1A3KN83 RPL35P9-201ENST00000446059 350 ntBASIC19.82■□□□□ 0.76
SBNO1A3KN83 AQP7P4-201ENST00000447083 1042 ntBASIC19.82■□□□□ 0.76
SBNO1A3KN83 AQP7P2-201ENST00000453967 1041 ntBASIC19.82■□□□□ 0.76
SBNO1A3KN83 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 RPL18AP8-201ENST00000486071 528 ntBASIC19.82■□□□□ 0.76
SBNO1A3KN83 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 AC068867.1-201ENST00000559855 150 ntBASIC19.82■□□□□ 0.76
SBNO1A3KN83 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
SBNO1A3KN83 AC124068.2-201ENST00000569473 1109 ntBASIC19.82■□□□□ 0.76
SBNO1A3KN83 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 AC007250.1-201ENST00000608934 338 ntBASIC19.82■□□□□ 0.76
SBNO1A3KN83 AP001527.2-201ENST00000614441 631 ntBASIC19.82■□□□□ 0.76
SBNO1A3KN83 AQP7P3-201ENST00000624547 1041 ntBASIC19.82■□□□□ 0.76
SBNO1A3KN83 AC002044.2-201ENST00000624910 970 ntBASIC19.82■□□□□ 0.76
SBNO1A3KN83 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.82■□□□□ 0.76
SBNO1A3KN83 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 MRPL37P1-201ENST00000592451 1337 ntBASIC19.81■□□□□ 0.76
SBNO1A3KN83 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 RN7SKP109-201ENST00000410592 316 ntBASIC19.81■□□□□ 0.76
SBNO1A3KN83 AC073869.2-201ENST00000417338 1026 ntBASIC19.81■□□□□ 0.76
SBNO1A3KN83 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 RN7SL277P-201ENST00000481521 288 ntBASIC19.81■□□□□ 0.76
SBNO1A3KN83 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 HERC2P11-201ENST00000562845 725 ntBASIC19.81■□□□□ 0.76
SBNO1A3KN83 AC100756.2-201ENST00000569537 736 ntBASIC19.81■□□□□ 0.76
SBNO1A3KN83 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC19.81■□□□□ 0.76
SBNO1A3KN83 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SBNO1A3KN83 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC19.8■□□□□ 0.76
SBNO1A3KN83 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
SBNO1A3KN83 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC19.8■□□□□ 0.76
SBNO1A3KN83 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.8■□□□□ 0.76
SBNO1A3KN83 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.8■□□□□ 0.76
SBNO1A3KN83 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.8■□□□□ 0.76
SBNO1A3KN83 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.8■□□□□ 0.76
SBNO1A3KN83 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.8■□□□□ 0.76
SBNO1A3KN83 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC19.8■□□□□ 0.76
SBNO1A3KN83 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19.8■□□□□ 0.76
SBNO1A3KN83 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SBNO1A3KN83 RN7SL665P-201ENST00000578793 300 ntBASIC19.8■□□□□ 0.76
SBNO1A3KN83 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC19.8■□□□□ 0.76
SBNO1A3KN83 AC011471.3-201ENST00000623576 402 ntBASIC19.8■□□□□ 0.76
SBNO1A3KN83 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SBNO1A3KN83 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms