Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC66A2RUB6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC66A2RUB6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC66A2RUB6 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC66A2RUB6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC66A2RUB6 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC66A2RUB6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC66A2RUB6 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CCDC66A2RUB6 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC66A2RUB6 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC66A2RUB6 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC66A2RUB6 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 MTND6P24-201ENST00000440466 518 ntBASIC16.32■□□□□ 0.2
CCDC66A2RUB6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.32■□□□□ 0.2
CCDC66A2RUB6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 MIR4469-201ENST00000583919 79 ntBASIC16.32■□□□□ 0.2
CCDC66A2RUB6 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC66A2RUB6 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 SLED1-202ENST00000512051 380 ntBASIC16.31■□□□□ 0.2
CCDC66A2RUB6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 AC015910.1-201ENST00000579400 975 ntBASIC16.31■□□□□ 0.2
CCDC66A2RUB6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 AC004835.2-201ENST00000603762 682 ntBASIC16.31■□□□□ 0.2
CCDC66A2RUB6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 AC009093.7-201ENST00000623853 1223 ntBASIC16.31■□□□□ 0.2
CCDC66A2RUB6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC66A2RUB6 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms