Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 FKBP4P6-201ENST00000457486 1332 ntBASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AC003102.2-201ENST00000589195 1469 ntBASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 SALL4P5-201ENST00000419001 1760 ntBASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AC106872.11-201ENST00000605838 421 ntBASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 AL138725.1-201ENST00000407347 1314 ntBASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 MIR600HG-201ENST00000449175 5984 ntBASIC15.14■□□□□ 0.01
RAI2Q9Y5P3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 AL354989.2-201ENST00000435838 1540 ntBASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 TLE1P1-201ENST00000422965 589 ntBASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 FAM8A4P-201ENST00000435433 1213 ntBASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 C2orf69P2-201ENST00000562032 1123 ntBASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI2Q9Y5P3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms