Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 AC007686.3-201ENST00000619017 3487 ntBASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PCDHGA9Q9Y5G4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 POM121L8P-201ENST00000417732 1281 ntBASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 POM121L9P-203ENST00000441984 1285 ntBASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 CHMP4BP1-201ENST00000556017 588 ntBASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 OR10B1P-201ENST00000601666 907 ntBASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 AL023803.2-201ENST00000620080 638 ntBASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 AC007191.1-201ENST00000623179 2995 ntBASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCDHGA9Q9Y5G4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.01□□□□□ -0.17
PCDHGA9Q9Y5G4 EIF3FP3-201ENST00000434851 1086 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms