Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 AL162726.2-201ENST00000438986 1017 ntBASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 AL358472.5-202ENST00000641448 1267 ntBASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 REXO1L4P-201ENST00000605109 1937 ntBASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 MTHFR-210ENST00000641407 2387 ntBASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAPPC4Q9Y296 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAPPC4Q9Y296 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TRAPPC4Q9Y296 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TRAPPC4Q9Y296 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAPPC4Q9Y296 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
TRAPPC4Q9Y296 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TRAPPC4Q9Y296 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TRAPPC4Q9Y296 INTS4P1-203ENST00000641008 3683 ntBASIC13.77□□□□□ -0.2
TRAPPC4Q9Y296 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAPPC4Q9Y296 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAPPC4Q9Y296 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAPPC4Q9Y296 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
TRAPPC4Q9Y296 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 DGCR5-201ENST00000399539 862 ntBASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 AC015802.1-201ENST00000588104 1449 ntBASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 WFDC1-204ENST00000613603 549 ntBASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 AL033527.5-201ENST00000641382 801 ntBASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAPPC4Q9Y296 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.76□□□□□ -0.21
TRAPPC4Q9Y296 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms