Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAK1Q9UPV9 AC073352.2-201ENST00000609385 439 ntBASIC20.68■□□□□ 0.9
TRAK1Q9UPV9 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC20.68■□□□□ 0.9
TRAK1Q9UPV9 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC20.68■□□□□ 0.9
TRAK1Q9UPV9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAK1Q9UPV9 STK26-204ENST00000481105 1835 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAK1Q9UPV9 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAK1Q9UPV9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAK1Q9UPV9 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAK1Q9UPV9 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRAK1Q9UPV9 CAP2P1-201ENST00000557743 1390 ntBASIC20.68■□□□□ 0.9
TRAK1Q9UPV9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAK1Q9UPV9 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 NEU3-205ENST00000531619 582 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 RN7SL555P-201ENST00000584742 339 ntBASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 AC103691.2-201ENST00000618824 433 ntBASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 MIR6727-201ENST00000620702 65 ntBASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 AC105917.1-201ENST00000506637 2539 ntBASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAK1Q9UPV9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 NCR3-202ENST00000376071 541 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 XBP1P1-201ENST00000436573 652 ntBASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 RN7SL67P-201ENST00000492147 296 ntBASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 KRT8P28-201ENST00000433288 1390 ntBASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 AL590440.2-201ENST00000641973 1595 ntBASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 AC013268.4-201ENST00000637413 2228 ntBASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAK1Q9UPV9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAK1Q9UPV9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAK1Q9UPV9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAK1Q9UPV9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAK1Q9UPV9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAK1Q9UPV9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAK1Q9UPV9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAK1Q9UPV9 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRAK1Q9UPV9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAK1Q9UPV9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAK1Q9UPV9 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC20.65■□□□□ 0.9
TRAK1Q9UPV9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms