Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
UPK3BQ9BT76 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UPK3BQ9BT76 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UPK3BQ9BT76 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC10.52□□□□□ -0.73
UPK3BQ9BT76 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UPK3BQ9BT76 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 HLA-DQB2-231ENST00000435145 2026 ntBASIC10.51□□□□□ -0.73
UPK3BQ9BT76 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 ZBTB12BP-201ENST00000314232 1122 ntBASIC10.51□□□□□ -0.73
UPK3BQ9BT76 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 MIR658-201ENST00000385210 100 ntBASIC10.51□□□□□ -0.73
UPK3BQ9BT76 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 RPL7P3-201ENST00000441388 714 ntBASIC10.51□□□□□ -0.73
UPK3BQ9BT76 KRT223P-202ENST00000449164 1292 ntBASIC10.51□□□□□ -0.73
UPK3BQ9BT76 AC007551.1-201ENST00000457394 519 ntBASIC10.51□□□□□ -0.73
UPK3BQ9BT76 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 LARP4-220ENST00000615080 856 ntTSL 5 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 PDIA3P1-201ENST00000471856 1510 ntBASIC10.51□□□□□ -0.73
UPK3BQ9BT76 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 AC007686.3-201ENST00000619017 3487 ntBASIC10.51□□□□□ -0.73
UPK3BQ9BT76 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 AC007292.2-201ENST00000593524 1812 ntBASIC10.51□□□□□ -0.73
UPK3BQ9BT76 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC10.51□□□□□ -0.73
UPK3BQ9BT76 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
UPK3BQ9BT76 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC10.5□□□□□ -0.73
UPK3BQ9BT76 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UPK3BQ9BT76 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms