Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.09■□□□□ 0.01
NDNQ99608 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.09■□□□□ 0.01
NDNQ99608 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.09■□□□□ 0.01
NDNQ99608 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.09■□□□□ 0.01
NDNQ99608 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
NDNQ99608 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.09■□□□□ 0.01
NDNQ99608 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.09■□□□□ 0.01
NDNQ99608 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.09■□□□□ 0.01
NDNQ99608 BRI3BPP1-201ENST00000594224 787 ntBASIC15.09■□□□□ 0.01
NDNQ99608 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.09■□□□□ 0.01
NDNQ99608 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.09■□□□□ 0.01
NDNQ99608 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 LINC01230-201ENST00000625222 3017 ntBASIC15.09■□□□□ 0.01
NDNQ99608 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.09■□□□□ 0.01
NDNQ99608 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.09■□□□□ 0.01
NDNQ99608 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.09■□□□□ 0.01
NDNQ99608 SLC7A15P-201ENST00000424028 1363 ntBASIC15.09■□□□□ 0.01
NDNQ99608 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NDNQ99608 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NDNQ99608 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.08■□□□□ 0.01
NDNQ99608 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NDNQ99608 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
NDNQ99608 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.08■□□□□ 0.01
NDNQ99608 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
NDNQ99608 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NDNQ99608 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NDNQ99608 TCAF1P1-201ENST00000414990 2232 ntBASIC15.08■□□□□ 0
NDNQ99608 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.08■□□□□ 0
NDNQ99608 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
NDNQ99608 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC15.08■□□□□ 0
NDNQ99608 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.08■□□□□ 0
NDNQ99608 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.08■□□□□ 0
NDNQ99608 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 MEP1AP4-201ENST00000423244 1087 ntBASIC15.08■□□□□ 0
NDNQ99608 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.08■□□□□ 0
NDNQ99608 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.08■□□□□ 0
NDNQ99608 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.08■□□□□ 0
NDNQ99608 AC093004.1-201ENST00000508850 424 ntBASIC15.08■□□□□ 0
NDNQ99608 SERBP1P5-201ENST00000510079 1181 ntBASIC15.08■□□□□ 0
NDNQ99608 RNA5SP421-201ENST00000516864 134 ntBASIC15.08■□□□□ 0
NDNQ99608 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.08■□□□□ 0
NDNQ99608 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.08■□□□□ 0
NDNQ99608 AC055876.2-201ENST00000531834 546 ntBASIC15.08■□□□□ 0
NDNQ99608 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.08■□□□□ 0
NDNQ99608 AC027796.2-201ENST00000575326 344 ntBASIC15.08■□□□□ 0
NDNQ99608 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NDNQ99608 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.08■□□□□ 0
NDNQ99608 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
NDNQ99608 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
NDNQ99608 AC023090.2-201ENST00000625182 2110 ntBASIC15.08■□□□□ 0
NDNQ99608 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NDNQ99608 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.08■□□□□ 0
NDNQ99608 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
NDNQ99608 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
NDNQ99608 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.08■□□□□ 0
NDNQ99608 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDNQ99608 AC113367.3-201ENST00000508316 1912 ntBASIC15.07■□□□□ 0
NDNQ99608 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.07■□□□□ 0
NDNQ99608 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDNQ99608 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
NDNQ99608 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDNQ99608 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDNQ99608 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDNQ99608 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDNQ99608 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
NDNQ99608 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDNQ99608 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDNQ99608 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDNQ99608 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NDNQ99608 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
NDNQ99608 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.07■□□□□ 0
NDNQ99608 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms