Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.82■□□□□ 0.28
USP6NLQ92738 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.82■□□□□ 0.28
USP6NLQ92738 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USP6NLQ92738 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
USP6NLQ92738 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.82■□□□□ 0.28
USP6NLQ92738 AP000356.3-201ENST00000382243 753 ntBASIC16.82■□□□□ 0.28
USP6NLQ92738 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.82■□□□□ 0.28
USP6NLQ92738 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.82■□□□□ 0.28
USP6NLQ92738 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
USP6NLQ92738 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.82■□□□□ 0.28
USP6NLQ92738 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.82■□□□□ 0.28
USP6NLQ92738 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
USP6NLQ92738 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USP6NLQ92738 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.82■□□□□ 0.28
USP6NLQ92738 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP6NLQ92738 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.81■□□□□ 0.28
USP6NLQ92738 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.81■□□□□ 0.28
USP6NLQ92738 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.81■□□□□ 0.28
USP6NLQ92738 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.81■□□□□ 0.28
USP6NLQ92738 LILRP1-201ENST00000444199 1370 ntBASIC16.81■□□□□ 0.28
USP6NLQ92738 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.81■□□□□ 0.28
USP6NLQ92738 AC090616.6-203ENST00000579186 1945 ntBASIC16.81■□□□□ 0.28
USP6NLQ92738 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 MIR557-201ENST00000385239 98 ntBASIC16.81■□□□□ 0.28
USP6NLQ92738 AL512430.1-201ENST00000392575 860 ntBASIC16.81■□□□□ 0.28
USP6NLQ92738 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.81■□□□□ 0.28
USP6NLQ92738 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.81■□□□□ 0.28
USP6NLQ92738 XBP1P1-201ENST00000436573 652 ntBASIC16.81■□□□□ 0.28
USP6NLQ92738 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.81■□□□□ 0.28
USP6NLQ92738 GCOM2-201ENST00000509133 1104 ntBASIC16.81■□□□□ 0.28
USP6NLQ92738 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.81■□□□□ 0.28
USP6NLQ92738 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.81■□□□□ 0.28
USP6NLQ92738 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.81■□□□□ 0.28
USP6NLQ92738 AC007881.3-201ENST00000608897 607 ntBASIC16.81■□□□□ 0.28
USP6NLQ92738 LINC01783-202ENST00000614408 828 ntBASIC16.81■□□□□ 0.28
USP6NLQ92738 MIR6756-201ENST00000616240 63 ntBASIC16.81■□□□□ 0.28
USP6NLQ92738 BX284668.2-205ENST00000619677 828 ntBASIC16.81■□□□□ 0.28
USP6NLQ92738 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.81■□□□□ 0.28
USP6NLQ92738 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.81■□□□□ 0.28
USP6NLQ92738 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.81■□□□□ 0.28
USP6NLQ92738 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.81■□□□□ 0.28
USP6NLQ92738 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
USP6NLQ92738 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.81■□□□□ 0.28
USP6NLQ92738 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP6NLQ92738 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
USP6NLQ92738 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
USP6NLQ92738 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.8■□□□□ 0.28
USP6NLQ92738 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.8■□□□□ 0.28
USP6NLQ92738 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
USP6NLQ92738 AL592076.1-201ENST00000424448 303 ntBASIC16.8■□□□□ 0.28
USP6NLQ92738 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.8■□□□□ 0.28
USP6NLQ92738 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.8■□□□□ 0.28
USP6NLQ92738 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.8■□□□□ 0.28
USP6NLQ92738 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.8■□□□□ 0.28
USP6NLQ92738 IGHV3-37-201ENST00000518544 340 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms