Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGB4Q8WW32 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB4Q8WW32 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB4Q8WW32 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMGB4Q8WW32 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB4Q8WW32 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB4Q8WW32 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB4Q8WW32 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 PDIA3P2-201ENST00000428073 158 ntBASIC14.96□□□□□ -0.01
HMGB4Q8WW32 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 AC069218.1-201ENST00000435269 762 ntBASIC14.96□□□□□ -0.01
HMGB4Q8WW32 VDAC1P1-201ENST00000439229 848 ntBASIC14.96□□□□□ -0.01
HMGB4Q8WW32 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 HLA-J-204ENST00000495278 958 ntBASIC14.96□□□□□ -0.01
HMGB4Q8WW32 SCARNA21-201ENST00000517026 139 ntBASIC14.96□□□□□ -0.01
HMGB4Q8WW32 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 NORAD-201ENST00000565493 5339 ntBASIC14.96□□□□□ -0.01
HMGB4Q8WW32 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 AC009884.2-201ENST00000603110 324 ntBASIC14.96□□□□□ -0.01
HMGB4Q8WW32 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB4Q8WW32 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.96□□□□□ -0.02
HMGB4Q8WW32 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.96□□□□□ -0.02
HMGB4Q8WW32 LILRP1-201ENST00000444199 1370 ntBASIC14.96□□□□□ -0.02
HMGB4Q8WW32 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HMGB4Q8WW32 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.96□□□□□ -0.02
HMGB4Q8WW32 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.96□□□□□ -0.02
HMGB4Q8WW32 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
HMGB4Q8WW32 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 AC253536.4-201ENST00000440539 267 ntBASIC14.95□□□□□ -0.02
HMGB4Q8WW32 AC073150.1-201ENST00000450406 1084 ntBASIC14.95□□□□□ -0.02
HMGB4Q8WW32 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 AC008825.2-201ENST00000603374 718 ntBASIC14.95□□□□□ -0.02
HMGB4Q8WW32 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 DBET-201ENST00000630918 3363 ntBASIC14.95□□□□□ -0.02
HMGB4Q8WW32 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HMGB4Q8WW32 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGB4Q8WW32 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms