Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.6□□□□□ -0.23
SNX33Q8WV41 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.6□□□□□ -0.23
SNX33Q8WV41 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX33Q8WV41 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.6□□□□□ -0.23
SNX33Q8WV41 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.6□□□□□ -0.23
SNX33Q8WV41 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.6□□□□□ -0.23
SNX33Q8WV41 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNX33Q8WV41 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.6□□□□□ -0.23
SNX33Q8WV41 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNX33Q8WV41 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNX33Q8WV41 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.6□□□□□ -0.23
SNX33Q8WV41 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX33Q8WV41 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
SNX33Q8WV41 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.6□□□□□ -0.23
SNX33Q8WV41 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SNX33Q8WV41 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX33Q8WV41 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX33Q8WV41 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX33Q8WV41 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.6□□□□□ -0.23
SNX33Q8WV41 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX33Q8WV41 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
SNX33Q8WV41 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SNX33Q8WV41 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX33Q8WV41 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 HSPA7-201ENST00000445535 1927 ntBASIC13.59□□□□□ -0.23
SNX33Q8WV41 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 AC236430.1-201ENST00000402231 743 ntBASIC13.59□□□□□ -0.23
SNX33Q8WV41 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 AC015922.1-201ENST00000421102 1152 ntBASIC13.59□□□□□ -0.23
SNX33Q8WV41 KRT18P64-201ENST00000434946 1219 ntBASIC13.59□□□□□ -0.23
SNX33Q8WV41 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 AC044860.1-202ENST00000559481 777 ntBASIC13.59□□□□□ -0.23
SNX33Q8WV41 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 LINC02560-201ENST00000596379 459 ntBASIC13.59□□□□□ -0.23
SNX33Q8WV41 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 AC008761.3-201ENST00000624803 892 ntBASIC13.59□□□□□ -0.23
SNX33Q8WV41 AL109936.8-201ENST00000641772 604 ntBASIC13.59□□□□□ -0.23
SNX33Q8WV41 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.59□□□□□ -0.23
SNX33Q8WV41 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX33Q8WV41 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX33Q8WV41 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNX33Q8WV41 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SNX33Q8WV41 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNX33Q8WV41 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
SNX33Q8WV41 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNX33Q8WV41 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.58□□□□□ -0.23
SNX33Q8WV41 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNX33Q8WV41 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
SNX33Q8WV41 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.58□□□□□ -0.23
SNX33Q8WV41 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.58□□□□□ -0.23
SNX33Q8WV41 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
SNX33Q8WV41 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNX33Q8WV41 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNX33Q8WV41 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms