Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AL391825.1-201ENST00000457671 1364 ntBASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 MIR661-201ENST00000384842 89 ntBASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AC134915.1-201ENST00000426461 574 ntBASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 FAM207CP-201ENST00000443486 507 ntBASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 TSPY16P-201ENST00000449843 468 ntBASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AC104596.2-201ENST00000512793 793 ntBASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AC124283.3-201ENST00000570869 594 ntBASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AC007431.3-201ENST00000623221 587 ntBASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 REXO1L5P-201ENST00000622260 2098 ntBASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF439Q8NDP4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms