Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 DUX4L46-201ENST00000566845 751 ntBASIC16.64■□□□□ 0.25
TRIM50Q86XT4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 AL023803.2-201ENST00000620080 638 ntBASIC16.64■□□□□ 0.25
TRIM50Q86XT4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM50Q86XT4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 AC105129.2-201ENST00000559536 390 ntBASIC16.63■□□□□ 0.25
TRIM50Q86XT4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 AC138627.1-207ENST00000641560 1006 ntBASIC16.63■□□□□ 0.25
TRIM50Q86XT4 AC004923.1-202ENST00000642106 209 ntBASIC16.63■□□□□ 0.25
TRIM50Q86XT4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 SALL4P5-201ENST00000419001 1760 ntBASIC16.63■□□□□ 0.25
TRIM50Q86XT4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM50Q86XT4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.62■□□□□ 0.25
TRIM50Q86XT4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM50Q86XT4 AC106794.1-201ENST00000506935 792 ntBASIC16.62■□□□□ 0.25
TRIM50Q86XT4 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.62■□□□□ 0.25
TRIM50Q86XT4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms