Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 AC023090.2-201ENST00000625182 2110 ntBASIC13.6□□□□□ -0.23
SHFQ7M4L6 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 AC025678.2-201ENST00000562061 970 ntBASIC13.6□□□□□ -0.23
SHFQ7M4L6 AC010336.2-201ENST00000564226 506 ntBASIC13.6□□□□□ -0.23
SHFQ7M4L6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 TUBB3P1-201ENST00000405796 1332 ntBASIC13.6□□□□□ -0.23
SHFQ7M4L6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHFQ7M4L6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SHFQ7M4L6 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHFQ7M4L6 AC004967.1-201ENST00000453589 447 ntBASIC13.59□□□□□ -0.23
SHFQ7M4L6 TPT1P11-201ENST00000458482 498 ntBASIC13.59□□□□□ -0.23
SHFQ7M4L6 AC069120.2-201ENST00000524091 540 ntBASIC13.59□□□□□ -0.23
SHFQ7M4L6 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 TIMM17BP1-201ENST00000545713 516 ntBASIC13.59□□□□□ -0.23
SHFQ7M4L6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
SHFQ7M4L6 AC000095.1-201ENST00000603208 874 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms