Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MROH4P-201ENST00000431302 1578 ntBASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 AC026434.2-201ENST00000506094 1078 ntBASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 DUX4L47-201ENST00000566374 394 ntBASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFWD3Q6PCD5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 REXO1L6P-201ENST00000603433 1515 ntBASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 AL137784.3-201ENST00000623858 2288 ntBASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 AC245100.3-201ENST00000441281 285 ntBASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 AC079316.1-201ENST00000548397 411 ntBASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 AL583810.1-201ENST00000553344 1045 ntBASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 AC006453.4-201ENST00000636949 1252 ntBASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 AC008687.7-202ENST00000637404 953 ntBASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 FGD5P1-202ENST00000614866 2498 ntBASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RFWD3Q6PCD5 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 POM121L8P-201ENST00000417732 1281 ntBASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 FAM21FP-201ENST00000426241 1131 ntBASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 POM121L9P-203ENST00000441984 1285 ntBASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 AC009542.2-202ENST00000619004 1067 ntBASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
RFWD3Q6PCD5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms