Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 AL390754.1-201ENST00000619088 582 ntBASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 AC100757.3-201ENST00000622361 1406 ntBASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 AL731571.1-201ENST00000617058 5428 ntBASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 AC136604.1-201ENST00000418535 575 ntBASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 HIST3H2BA-201ENST00000436555 524 ntBASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 AC093214.1-201ENST00000511688 1107 ntBASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 SDHAP3-202ENST00000515467 728 ntBASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 HNRNPUP1-201ENST00000554987 333 ntBASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 AL590560.3-201ENST00000623350 461 ntBASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM53Q6P2H8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 AC018892.3-201ENST00000623986 2499 ntBASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms