Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 AC215219.1-201ENST00000400706 1817 ntBASIC13.69□□□□□ -0.22
RBM48Q5RL73 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 AC099522.2-201ENST00000607001 744 ntBASIC13.69□□□□□ -0.22
RBM48Q5RL73 MIR7706-201ENST00000613747 67 ntBASIC13.69□□□□□ -0.22
RBM48Q5RL73 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 AC072061.1-201ENST00000569710 2234 ntBASIC13.69□□□□□ -0.22
RBM48Q5RL73 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.69□□□□□ -0.22
RBM48Q5RL73 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RBM48Q5RL73 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 EMBP1-201ENST00000458200 901 ntBASIC13.68□□□□□ -0.22
RBM48Q5RL73 MYADML-201ENST00000474610 2147 ntBASIC13.68□□□□□ -0.22
RBM48Q5RL73 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 AC112191.1-201ENST00000523689 701 ntBASIC13.68□□□□□ -0.22
RBM48Q5RL73 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 KRT19P2-202ENST00000557173 1012 ntBASIC13.68□□□□□ -0.22
RBM48Q5RL73 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 AL049840.3-201ENST00000602669 611 ntBASIC13.68□□□□□ -0.22
RBM48Q5RL73 MIR6074-201ENST00000612054 107 ntBASIC13.68□□□□□ -0.22
RBM48Q5RL73 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RBM48Q5RL73 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RBM48Q5RL73 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms