Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB1AP62820 AL359183.1-201ENST00000623796 2132 ntBASIC13.22□□□□□ -0.29
RAB1AP62820 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RAB1AP62820 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RAB1AP62820 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB1AP62820 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RAB1AP62820 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 EIF3FP3-201ENST00000434851 1086 ntBASIC13.22□□□□□ -0.29
RAB1AP62820 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB1AP62820 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB1AP62820 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB1AP62820 AC106760.1-201ENST00000508690 800 ntBASIC13.22□□□□□ -0.29
RAB1AP62820 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
RAB1AP62820 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.22□□□□□ -0.29
RAB1AP62820 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RAB1AP62820 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RAB1AP62820 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.22□□□□□ -0.29
RAB1AP62820 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RAB1AP62820 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
RAB1AP62820 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RAB1AP62820 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RAB1AP62820 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB1AP62820 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RAB1AP62820 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.22□□□□□ -0.29
RAB1AP62820 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB1AP62820 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RAB1AP62820 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 AC106881.1-201ENST00000605849 3329 ntBASIC13.21□□□□□ -0.29
RAB1AP62820 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RAB1AP62820 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RAB1AP62820 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 AC067750.1-201ENST00000608826 6545 ntBASIC13.21□□□□□ -0.29
RAB1AP62820 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB1AP62820 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RAB1AP62820 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB1AP62820 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB1AP62820 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
RAB1AP62820 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB1AP62820 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RAB1AP62820 C2orf27AP3-201ENST00000434123 579 ntBASIC13.21□□□□□ -0.29
RAB1AP62820 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB1AP62820 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.21□□□□□ -0.29
RAB1AP62820 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB1AP62820 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB1AP62820 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
RAB1AP62820 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB1AP62820 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.21□□□□□ -0.29
RAB1AP62820 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB1AP62820 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB1AP62820 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB1AP62820 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB1AP62820 AL354718.3-201ENST00000616414 581 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms