Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.68■□□□□ 0.74
ZC3H6P61129 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.67■□□□□ 0.74
ZC3H6P61129 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.67■□□□□ 0.74
ZC3H6P61129 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
ZC3H6P61129 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC19.67■□□□□ 0.74
ZC3H6P61129 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC19.67■□□□□ 0.74
ZC3H6P61129 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ZC3H6P61129 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ZC3H6P61129 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC19.67■□□□□ 0.74
ZC3H6P61129 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.67■□□□□ 0.74
ZC3H6P61129 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 F10-203ENST00000409306 1450 ntTSL 3 BASIC19.67■□□□□ 0.74
ZC3H6P61129 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H6P61129 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.66■□□□□ 0.74
ZC3H6P61129 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.66■□□□□ 0.74
ZC3H6P61129 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.66■□□□□ 0.74
ZC3H6P61129 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ZC3H6P61129 AC084018.2-201ENST00000613093 2607 ntBASIC19.66■□□□□ 0.74
ZC3H6P61129 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ZC3H6P61129 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.66■□□□□ 0.74
ZC3H6P61129 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZC3H6P61129 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZC3H6P61129 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZC3H6P61129 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ZC3H6P61129 RN7SL396P-201ENST00000471086 295 ntBASIC19.66■□□□□ 0.74
ZC3H6P61129 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC19.66■□□□□ 0.74
ZC3H6P61129 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ZC3H6P61129 DBP-202ENST00000593500 712 ntTSL 2 BASIC19.66■□□□□ 0.74
ZC3H6P61129 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC19.66■□□□□ 0.74
ZC3H6P61129 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
ZC3H6P61129 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ZC3H6P61129 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ZC3H6P61129 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H6P61129 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZC3H6P61129 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.65■□□□□ 0.74
ZC3H6P61129 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZC3H6P61129 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ZC3H6P61129 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC19.65■□□□□ 0.74
ZC3H6P61129 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC19.65■□□□□ 0.74
ZC3H6P61129 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC19.65■□□□□ 0.74
ZC3H6P61129 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC19.65■□□□□ 0.74
ZC3H6P61129 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC19.65■□□□□ 0.74
ZC3H6P61129 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC19.65■□□□□ 0.74
ZC3H6P61129 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.65■□□□□ 0.74
ZC3H6P61129 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ZC3H6P61129 AC011270.2-201ENST00000624293 2550 ntBASIC19.65■□□□□ 0.74
ZC3H6P61129 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.65■□□□□ 0.74
ZC3H6P61129 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC19.65■□□□□ 0.74
ZC3H6P61129 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.65■□□□□ 0.74
ZC3H6P61129 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms