Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CDC42P60953 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CDC42P60953 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CDC42P60953 TOMM22P5-201ENST00000416399 439 ntBASIC13.75□□□□□ -0.21
CDC42P60953 KRT18P32-201ENST00000424695 1287 ntBASIC13.75□□□□□ -0.21
CDC42P60953 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC42P60953 RPL13P2-201ENST00000440687 659 ntBASIC13.75□□□□□ -0.21
CDC42P60953 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC42P60953 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.75□□□□□ -0.21
CDC42P60953 AL079307.3-201ENST00000556114 283 ntBASIC13.75□□□□□ -0.21
CDC42P60953 AC025048.3-201ENST00000590609 569 ntBASIC13.75□□□□□ -0.21
CDC42P60953 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.75□□□□□ -0.21
CDC42P60953 AC120114.3-201ENST00000611923 658 ntBASIC13.75□□□□□ -0.21
CDC42P60953 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 AC005702.4-201ENST00000618393 416 ntBASIC13.75□□□□□ -0.21
CDC42P60953 LINC00628-201ENST00000628516 1289 ntBASIC13.75□□□□□ -0.21
CDC42P60953 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.75□□□□□ -0.21
CDC42P60953 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 AC090505.1-201ENST00000430515 1834 ntBASIC13.75□□□□□ -0.21
CDC42P60953 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC42P60953 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDC42P60953 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CDC42P60953 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDC42P60953 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC42P60953 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC42P60953 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDC42P60953 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CDC42P60953 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
CDC42P60953 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 AC023274.1-201ENST00000418278 595 ntBASIC13.74□□□□□ -0.21
CDC42P60953 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.74□□□□□ -0.21
CDC42P60953 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.74□□□□□ -0.21
CDC42P60953 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.74□□□□□ -0.21
CDC42P60953 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 AF228730.6-201ENST00000641497 218 ntBASIC13.74□□□□□ -0.21
CDC42P60953 AC084121.3-201ENST00000641716 218 ntBASIC13.74□□□□□ -0.21
CDC42P60953 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 AC130686.1-201ENST00000622936 2466 ntBASIC13.74□□□□□ -0.21
CDC42P60953 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 AL157414.3-201ENST00000624276 1954 ntBASIC13.74□□□□□ -0.21
CDC42P60953 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 TCAM1P-207ENST00000485295 1537 ntBASIC13.74□□□□□ -0.21
CDC42P60953 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDC42P60953 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42P60953 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC42P60953 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42P60953 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms