Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.73□□□□□ -0.21
NR4A2P43354 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.73□□□□□ -0.21
NR4A2P43354 MIR4321-201ENST00000592276 80 ntBASIC13.73□□□□□ -0.21
NR4A2P43354 RN7SL828P-201ENST00000607615 303 ntBASIC13.73□□□□□ -0.21
NR4A2P43354 TEX28P1-201ENST00000613479 1221 ntBASIC13.73□□□□□ -0.21
NR4A2P43354 AL662799.1-202ENST00000614205 422 ntBASIC13.73□□□□□ -0.21
NR4A2P43354 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 TEX28P2-201ENST00000617764 1221 ntBASIC13.73□□□□□ -0.21
NR4A2P43354 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NR4A2P43354 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.73□□□□□ -0.21
NR4A2P43354 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
NR4A2P43354 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.73□□□□□ -0.21
NR4A2P43354 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NR4A2P43354 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A2P43354 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
NR4A2P43354 AC134407.2-201ENST00000625089 1978 ntBASIC13.72□□□□□ -0.21
NR4A2P43354 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NR4A2P43354 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NR4A2P43354 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.72□□□□□ -0.21
NR4A2P43354 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
NR4A2P43354 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NR4A2P43354 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 AC087499.5-201ENST00000452760 1342 ntBASIC13.72□□□□□ -0.21
NR4A2P43354 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NR4A2P43354 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.72□□□□□ -0.21
NR4A2P43354 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.72□□□□□ -0.21
NR4A2P43354 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.72□□□□□ -0.21
NR4A2P43354 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.72□□□□□ -0.21
NR4A2P43354 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.72□□□□□ -0.21
NR4A2P43354 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.72□□□□□ -0.21
NR4A2P43354 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.72□□□□□ -0.21
NR4A2P43354 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.72□□□□□ -0.21
NR4A2P43354 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.72□□□□□ -0.21
NR4A2P43354 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.72□□□□□ -0.21
NR4A2P43354 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.72□□□□□ -0.21
NR4A2P43354 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 AC105021.1-202ENST00000570572 669 ntBASIC13.72□□□□□ -0.21
NR4A2P43354 SPDYE22P-201ENST00000582158 798 ntBASIC13.72□□□□□ -0.21
NR4A2P43354 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.72□□□□□ -0.21
NR4A2P43354 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.72□□□□□ -0.21
NR4A2P43354 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.72□□□□□ -0.21
NR4A2P43354 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.72□□□□□ -0.21
NR4A2P43354 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NR4A2P43354 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.72□□□□□ -0.21
NR4A2P43354 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NR4A2P43354 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.72□□□□□ -0.21
NR4A2P43354 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR4A2P43354 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A2P43354 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.71□□□□□ -0.21
NR4A2P43354 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NR4A2P43354 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.71□□□□□ -0.21
NR4A2P43354 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A2P43354 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A2P43354 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A2P43354 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A2P43354 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms