Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.88■□□□□ 0.13
CTNNA1P35221 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.88■□□□□ 0.13
CTNNA1P35221 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CTNNA1P35221 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.88■□□□□ 0.13
CTNNA1P35221 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CTNNA1P35221 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CTNNA1P35221 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CTNNA1P35221 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.87■□□□□ 0.13
CTNNA1P35221 AC055811.4-201ENST00000624039 1754 ntBASIC15.87■□□□□ 0.13
CTNNA1P35221 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CTNNA1P35221 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CTNNA1P35221 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CTNNA1P35221 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CTNNA1P35221 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.87■□□□□ 0.13
CTNNA1P35221 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.87■□□□□ 0.13
CTNNA1P35221 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.87■□□□□ 0.13
CTNNA1P35221 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.87■□□□□ 0.13
CTNNA1P35221 FAM86LP-201ENST00000478302 853 ntBASIC15.87■□□□□ 0.13
CTNNA1P35221 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 IGHV3-42-201ENST00000520410 361 ntBASIC15.87■□□□□ 0.13
CTNNA1P35221 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.87■□□□□ 0.13
CTNNA1P35221 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.87■□□□□ 0.13
CTNNA1P35221 AC135586.1-201ENST00000539323 574 ntBASIC15.87■□□□□ 0.13
CTNNA1P35221 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.87■□□□□ 0.13
CTNNA1P35221 AC036164.1-201ENST00000570544 333 ntBASIC15.87■□□□□ 0.13
CTNNA1P35221 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.87■□□□□ 0.13
CTNNA1P35221 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.87■□□□□ 0.13
CTNNA1P35221 AL354702.1-201ENST00000442006 1960 ntBASIC15.87■□□□□ 0.13
CTNNA1P35221 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CTNNA1P35221 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTNNA1P35221 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.87■□□□□ 0.13
CTNNA1P35221 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.87■□□□□ 0.13
CTNNA1P35221 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.87■□□□□ 0.13
CTNNA1P35221 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTNNA1P35221 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTNNA1P35221 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTNNA1P35221 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTNNA1P35221 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.86■□□□□ 0.13
CTNNA1P35221 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CTNNA1P35221 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.86■□□□□ 0.13
CTNNA1P35221 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.86■□□□□ 0.13
CTNNA1P35221 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTNNA1P35221 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CTNNA1P35221 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.86■□□□□ 0.13
CTNNA1P35221 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.86■□□□□ 0.13
CTNNA1P35221 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTNNA1P35221 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CTNNA1P35221 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTNNA1P35221 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CTNNA1P35221 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.86■□□□□ 0.13
CTNNA1P35221 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.86■□□□□ 0.13
CTNNA1P35221 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTNNA1P35221 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.86■□□□□ 0.13
CTNNA1P35221 DUX4L27-201ENST00000554796 1261 ntBASIC15.86■□□□□ 0.13
CTNNA1P35221 RARRES2P5-201ENST00000564013 466 ntBASIC15.86■□□□□ 0.13
CTNNA1P35221 AL662799.1-202ENST00000614205 422 ntBASIC15.86■□□□□ 0.13
CTNNA1P35221 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTNNA1P35221 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.86■□□□□ 0.13
CTNNA1P35221 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CTNNA1P35221 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.86■□□□□ 0.13
CTNNA1P35221 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.86■□□□□ 0.13
CTNNA1P35221 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.86■□□□□ 0.13
CTNNA1P35221 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.86■□□□□ 0.13
CTNNA1P35221 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTNNA1P35221 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CTNNA1P35221 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTNNA1P35221 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTNNA1P35221 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.86■□□□□ 0.13
CTNNA1P35221 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.86■□□□□ 0.13
CTNNA1P35221 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTNNA1P35221 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTNNA1P35221 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTNNA1P35221 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CTNNA1P35221 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTNNA1P35221 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.85■□□□□ 0.13
CTNNA1P35221 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTNNA1P35221 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTNNA1P35221 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms