Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LAMA1P25391 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.25□□□□□ -0.13
LAMA1P25391 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.25□□□□□ -0.13
LAMA1P25391 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LAMA1P25391 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.25□□□□□ -0.13
LAMA1P25391 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.25□□□□□ -0.13
LAMA1P25391 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.25□□□□□ -0.13
LAMA1P25391 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LAMA1P25391 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.25□□□□□ -0.13
LAMA1P25391 AC114947.1-202ENST00000514136 344 ntBASIC14.25□□□□□ -0.13
LAMA1P25391 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.25□□□□□ -0.13
LAMA1P25391 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.25□□□□□ -0.13
LAMA1P25391 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LAMA1P25391 AC073592.2-201ENST00000623062 780 ntBASIC14.25□□□□□ -0.13
LAMA1P25391 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.25□□□□□ -0.13
LAMA1P25391 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 AC105917.1-201ENST00000506637 2539 ntBASIC14.25□□□□□ -0.13
LAMA1P25391 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 KRT8P28-201ENST00000433288 1390 ntBASIC14.25□□□□□ -0.13
LAMA1P25391 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LAMA1P25391 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.25□□□□□ -0.13
LAMA1P25391 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LAMA1P25391 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 AC232323.1-201ENST00000540724 2099 ntBASIC14.25□□□□□ -0.13
LAMA1P25391 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 BRI3P1-201ENST00000440440 378 ntBASIC14.25□□□□□ -0.13
LAMA1P25391 AC244197.1-201ENST00000456494 951 ntBASIC14.25□□□□□ -0.13
LAMA1P25391 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.25□□□□□ -0.13
LAMA1P25391 AC007326.1-201ENST00000604539 458 ntBASIC14.25□□□□□ -0.13
LAMA1P25391 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LAMA1P25391 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.24□□□□□ -0.13
LAMA1P25391 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.24□□□□□ -0.13
LAMA1P25391 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LAMA1P25391 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.24□□□□□ -0.13
LAMA1P25391 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.24□□□□□ -0.13
LAMA1P25391 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.24□□□□□ -0.13
LAMA1P25391 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.24□□□□□ -0.13
LAMA1P25391 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.24□□□□□ -0.13
LAMA1P25391 FTLP5-201ENST00000586853 534 ntBASIC14.24□□□□□ -0.13
LAMA1P25391 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.24□□□□□ -0.13
LAMA1P25391 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.24□□□□□ -0.13
LAMA1P25391 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LAMA1P25391 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LAMA1P25391 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LAMA1P25391 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.24□□□□□ -0.13
LAMA1P25391 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.24□□□□□ -0.13
LAMA1P25391 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.24□□□□□ -0.13
LAMA1P25391 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
LAMA1P25391 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.24□□□□□ -0.13
LAMA1P25391 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.24□□□□□ -0.13
LAMA1P25391 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 AL591122.2-201ENST00000624125 1853 ntBASIC14.24□□□□□ -0.13
LAMA1P25391 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LAMA1P25391 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LAMA1P25391 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LAMA1P25391 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.23□□□□□ -0.13
LAMA1P25391 AL592076.1-201ENST00000424448 303 ntBASIC14.23□□□□□ -0.13
LAMA1P25391 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.23□□□□□ -0.13
LAMA1P25391 HERC2P11-201ENST00000562845 725 ntBASIC14.23□□□□□ -0.13
LAMA1P25391 AC100756.2-201ENST00000569537 736 ntBASIC14.23□□□□□ -0.13
LAMA1P25391 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 AC097359.2-201ENST00000604992 2389 ntBASIC14.23□□□□□ -0.13
LAMA1P25391 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.23□□□□□ -0.13
LAMA1P25391 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms