Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 AC040160.2-201ENST00000623816 1675 ntBASIC12.93□□□□□ -0.34
VSIG8P0DPA2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 YY1P1-201ENST00000427625 668 ntBASIC12.93□□□□□ -0.34
VSIG8P0DPA2 HLA-K-203ENST00000430151 1046 ntBASIC12.93□□□□□ -0.34
VSIG8P0DPA2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 RPL12P24-201ENST00000474907 486 ntBASIC12.93□□□□□ -0.34
VSIG8P0DPA2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 GAPDHP40-201ENST00000505218 1006 ntBASIC12.93□□□□□ -0.34
VSIG8P0DPA2 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 AC006213.5-201ENST00000619673 288 ntBASIC12.93□□□□□ -0.34
VSIG8P0DPA2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VSIG8P0DPA2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 PSMC1P2-201ENST00000423961 1204 ntBASIC12.92□□□□□ -0.34
VSIG8P0DPA2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 AC044860.1-202ENST00000559481 777 ntBASIC12.92□□□□□ -0.34
VSIG8P0DPA2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 AC012645.4-201ENST00000610691 1061 ntBASIC12.92□□□□□ -0.34
VSIG8P0DPA2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.92□□□□□ -0.34
VSIG8P0DPA2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms