Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.25□□□□□ -0.61
SMIM17P0DL12 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.25□□□□□ -0.61
SMIM17P0DL12 AP000845.1-201ENST00000581677 2131 ntBASIC11.25□□□□□ -0.61
SMIM17P0DL12 IRF5-214ENST00000613821 595 ntTSL 5 BASIC11.25□□□□□ -0.61
SMIM17P0DL12 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.25□□□□□ -0.61
SMIM17P0DL12 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.25□□□□□ -0.61
SMIM17P0DL12 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.25□□□□□ -0.61
SMIM17P0DL12 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
SMIM17P0DL12 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SMIM17P0DL12 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.25□□□□□ -0.61
SMIM17P0DL12 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
SMIM17P0DL12 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
SMIM17P0DL12 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 AC092123.2-201ENST00000611189 5421 ntBASIC11.25□□□□□ -0.61
SMIM17P0DL12 ACE3P-201ENST00000423435 1973 ntBASIC11.25□□□□□ -0.61
SMIM17P0DL12 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
SMIM17P0DL12 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM17P0DL12 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 PP7080-204ENST00000510714 601 ntTSL 3 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 AP000842.3-202ENST00000569238 1080 ntBASIC11.24□□□□□ -0.61
SMIM17P0DL12 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 AC097359.3-201ENST00000603982 1210 ntBASIC11.24□□□□□ -0.61
SMIM17P0DL12 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.24□□□□□ -0.61
SMIM17P0DL12 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 ZNF259P1-201ENST00000407656 1365 ntBASIC11.24□□□□□ -0.61
SMIM17P0DL12 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
SMIM17P0DL12 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM17P0DL12 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 AL591122.2-201ENST00000624125 1853 ntBASIC11.23□□□□□ -0.61
SMIM17P0DL12 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SMIM17P0DL12 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SMIM17P0DL12 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms