Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TTC4O95801 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC4O95801 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TTC4O95801 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC4O95801 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC4O95801 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TTC4O95801 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TTC4O95801 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC4O95801 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC4O95801 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.41■□□□□ 0.06
TTC4O95801 AC241585.1-201ENST00000433527 519 ntBASIC15.41■□□□□ 0.06
TTC4O95801 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC4O95801 GAPDHP40-201ENST00000505218 1006 ntBASIC15.41■□□□□ 0.06
TTC4O95801 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC4O95801 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC4O95801 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TTC4O95801 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC4O95801 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC4O95801 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC4O95801 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.41■□□□□ 0.06
TTC4O95801 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TTC4O95801 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TTC4O95801 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC4O95801 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC4O95801 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TTC4O95801 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TTC4O95801 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TTC4O95801 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC4O95801 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC4O95801 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TTC4O95801 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TTC4O95801 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TTC4O95801 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
TTC4O95801 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC4O95801 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC4O95801 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC4O95801 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
TTC4O95801 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
TTC4O95801 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC4O95801 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.4■□□□□ 0.06
TTC4O95801 AL158212.4-201ENST00000624062 1286 ntBASIC15.4■□□□□ 0.06
TTC4O95801 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC4O95801 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC4O95801 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC4O95801 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC4O95801 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.06
TTC4O95801 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC4O95801 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TTC4O95801 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC4O95801 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TTC4O95801 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TTC4O95801 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.39■□□□□ 0.05
TTC4O95801 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC4O95801 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC4O95801 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TTC4O95801 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC4O95801 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms