Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
ALX3O95076 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.36□□□□□ -0.27
ALX3O95076 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.36□□□□□ -0.27
ALX3O95076 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 AC074338.1-201ENST00000416825 156 ntBASIC13.36□□□□□ -0.27
ALX3O95076 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.36□□□□□ -0.27
ALX3O95076 SERBP1P3-201ENST00000459980 809 ntBASIC13.36□□□□□ -0.27
ALX3O95076 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.36□□□□□ -0.27
ALX3O95076 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.36□□□□□ -0.27
ALX3O95076 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.36□□□□□ -0.27
ALX3O95076 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ALX3O95076 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.36□□□□□ -0.27
ALX3O95076 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ALX3O95076 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.36□□□□□ -0.27
ALX3O95076 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ALX3O95076 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.36□□□□□ -0.27
ALX3O95076 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ALX3O95076 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.36□□□□□ -0.27
ALX3O95076 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ALX3O95076 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 ACE3P-201ENST00000423435 1973 ntBASIC13.36□□□□□ -0.27
ALX3O95076 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
ALX3O95076 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALX3O95076 AC012508.2-201ENST00000567613 1472 ntBASIC13.36□□□□□ -0.27
ALX3O95076 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ALX3O95076 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ALX3O95076 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ALX3O95076 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ALX3O95076 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ALX3O95076 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 TOMM22P5-201ENST00000416399 439 ntBASIC13.35□□□□□ -0.27
ALX3O95076 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.35□□□□□ -0.27
ALX3O95076 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.35□□□□□ -0.27
ALX3O95076 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.35□□□□□ -0.27
ALX3O95076 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.35□□□□□ -0.27
ALX3O95076 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ALX3O95076 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.35□□□□□ -0.27
ALX3O95076 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 AL096865.1-201ENST00000606796 927 ntBASIC13.35□□□□□ -0.27
ALX3O95076 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.35□□□□□ -0.27
ALX3O95076 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.35□□□□□ -0.27
ALX3O95076 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ALX3O95076 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ALX3O95076 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.35□□□□□ -0.27
ALX3O95076 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ALX3O95076 AC097359.2-201ENST00000604992 2389 ntBASIC13.35□□□□□ -0.27
ALX3O95076 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ALX3O95076 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ALX3O95076 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.34□□□□□ -0.27
ALX3O95076 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.34□□□□□ -0.27
ALX3O95076 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.34□□□□□ -0.27
ALX3O95076 AC015818.8-201ENST00000587907 1519 ntBASIC13.34□□□□□ -0.27
ALX3O95076 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ALX3O95076 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms