Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 AC051619.9-201ENST00000623237 597 ntBASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 AL805961.1-201ENST00000642026 753 ntBASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC187A0A096LP49 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 AL627231.1-201ENST00000394467 1125 ntBASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 AL035414.1-201ENST00000451327 857 ntBASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 AC103810.10-201ENST00000606504 343 ntBASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 RN7SL736P-201ENST00000613111 269 ntBASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 AC027601.3-201ENST00000622907 509 ntBASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC187A0A096LP49 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 AP005117.1-202ENST00000581724 1908 ntBASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 AC105917.1-201ENST00000506637 2539 ntBASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 FAM90A2P-201ENST00000511144 1395 ntBASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 FAM90A25P-201ENST00000528404 1395 ntBASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 TCAF2P1-201ENST00000291129 2421 ntBASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC187A0A096LP49 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms