Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 AC226150.1-201ENST00000544259 466 ntBASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 MT2A-202ENST00000561491 581 ntTSL 2 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 AC055811.3-201ENST00000584952 686 ntBASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 TP53-221ENST00000615910 1149 ntTSL 5 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 FAM90A21P-201ENST00000510875 1396 ntBASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 FAM90A15P-201ENST00000514465 1395 ntBASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 FAM90A6P-201ENST00000515148 1394 ntBASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 FAM90A16P-201ENST00000526662 1395 ntBASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 FAM90A9P-201ENST00000527940 1395 ntBASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 FAM90A5P-201ENST00000528738 1395 ntBASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 FAM90A14P-201ENST00000530386 1395 ntBASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 FAM90A13P-201ENST00000534703 1395 ntBASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 AC007950.2-201ENST00000615045 2347 ntBASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
CDC42BPBQ9Y5S2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 AC005740.1-201ENST00000515639 522 ntBASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 SORD2P-201ENST00000558556 1069 ntBASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 HMGB1P24-201ENST00000611897 328 ntBASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 AC091951.1-201ENST00000512854 2465 ntBASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 CCT8L1P-201ENST00000465400 1674 ntBASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CDC42BPBQ9Y5S2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 AC117503.4-201ENST00000623229 1418 ntBASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 ACTG1P19-201ENST00000418987 1116 ntBASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 FAU-202ENST00000434372 533 ntTSL 2 BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 RN7SL788P-201ENST00000460504 316 ntBASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 MAX-218ENST00000557746 571 ntTSL 4 BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 AL021707.6-201ENST00000609212 491 ntBASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPBQ9Y5S2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42BPBQ9Y5S2 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC21.83■■□□□ 1.09
CDC42BPBQ9Y5S2 NME4-203ENST00000397722 1232 ntTSL 2 BASIC21.83■■□□□ 1.09
CDC42BPBQ9Y5S2 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42BPBQ9Y5S2 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CDC42BPBQ9Y5S2 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC21.83■■□□□ 1.09
CDC42BPBQ9Y5S2 AC026470.1-201ENST00000478038 846 ntBASIC21.83■■□□□ 1.09
CDC42BPBQ9Y5S2 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC21.83■■□□□ 1.09
CDC42BPBQ9Y5S2 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms