Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 AC093214.1-201ENST00000511688 1107 ntBASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 RFPL4AP1-201ENST00000530883 850 ntBASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 AL844908.2-201ENST00000609461 460 ntBASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HHLA3Q9XRX5 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 NUTM2HP-201ENST00000442076 2498 ntBASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AL133267.1-201ENST00000398220 340 ntBASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 TOMM22P5-201ENST00000416399 439 ntBASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AC074338.1-201ENST00000416825 156 ntBASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 RPL13P2-201ENST00000440687 659 ntBASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms