Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 OR2R1P-201ENST00000441404 914 ntBASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 PGAM1P5-201ENST00000548011 764 ntBASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 COG4-212ENST00000564653 590 ntTSL 5 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 MIR6074-201ENST00000612054 107 ntBASIC17■□□□□ 0.31
SYNPO2Q9UMS6 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 AC006453.1-201ENST00000636037 1257 ntBASIC17■□□□□ 0.31
SYNPO2Q9UMS6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17■□□□□ 0.31
SYNPO2Q9UMS6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYNPO2Q9UMS6 AC015688.4-201ENST00000580780 1647 ntBASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 TSPY25P-201ENST00000429463 745 ntBASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms