Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 AL137784.3-201ENST00000623858 2288 ntBASIC18.47■□□□□ 0.55
UPF2Q9HAU5 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 AL731571.1-201ENST00000617058 5428 ntBASIC18.47■□□□□ 0.55
UPF2Q9HAU5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 MIR940-201ENST00000401276 94 ntBASIC18.46■□□□□ 0.55
UPF2Q9HAU5 AL080243.2-201ENST00000418783 582 ntBASIC18.46■□□□□ 0.55
UPF2Q9HAU5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 MIR4453-201ENST00000584019 89 ntBASIC18.46■□□□□ 0.55
UPF2Q9HAU5 LINC01115-203ENST00000606068 577 ntBASIC18.46■□□□□ 0.55
UPF2Q9HAU5 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 AL157414.3-201ENST00000624276 1954 ntBASIC18.46■□□□□ 0.55
UPF2Q9HAU5 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF2Q9HAU5 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
UPF2Q9HAU5 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
UPF2Q9HAU5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.54
UPF2Q9HAU5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
UPF2Q9HAU5 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 ALG1L5P-201ENST00000482043 771 ntBASIC18.45■□□□□ 0.54
UPF2Q9HAU5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 AL513210.1-201ENST00000629608 234 ntBASIC18.45■□□□□ 0.54
UPF2Q9HAU5 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms