Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 AC092337.1-201ENST00000568699 1129 ntBASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
HDHD3Q9BSH5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 AC012617.1-204ENST00000586340 2305 ntBASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 AC100757.3-201ENST00000622361 1406 ntBASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.71□□□□□ -0.38
HDHD3Q9BSH5 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 AC093525.8-201ENST00000624099 1342 ntBASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 AC011474.4-201ENST00000623523 2076 ntBASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 AC114501.2-201ENST00000439631 535 ntBASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 AC004449.1-201ENST00000564240 433 ntBASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 AC140878.1-201ENST00000565277 250 ntBASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HDHD3Q9BSH5 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 AC089987.1-201ENST00000551654 2209 ntBASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms