Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 ELK1P1-201ENST00000485699 580 ntBASIC15.87■□□□□ 0.13
TRIM11Q96F44 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 API5-211ENST00000534695 560 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 AC027796.2-201ENST00000575326 344 ntBASIC15.87■□□□□ 0.13
TRIM11Q96F44 AC140912.1-201ENST00000577171 1054 ntBASIC15.87■□□□□ 0.13
TRIM11Q96F44 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 CU634019.7-201ENST00000624153 1185 ntBASIC15.87■□□□□ 0.13
TRIM11Q96F44 FP236241.2-201ENST00000624906 1185 ntBASIC15.87■□□□□ 0.13
TRIM11Q96F44 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 HSPA7-201ENST00000445535 1927 ntBASIC15.86■□□□□ 0.13
TRIM11Q96F44 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 AC022137.2-201ENST00000503482 481 ntBASIC15.86■□□□□ 0.13
TRIM11Q96F44 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 LINC02560-201ENST00000596379 459 ntBASIC15.86■□□□□ 0.13
TRIM11Q96F44 AL096865.1-201ENST00000606796 927 ntBASIC15.86■□□□□ 0.13
TRIM11Q96F44 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 SNX18-202ENST00000343017 3140 ntBASIC15.86■□□□□ 0.13
TRIM11Q96F44 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 AC097359.2-201ENST00000604992 2389 ntBASIC15.86■□□□□ 0.13
TRIM11Q96F44 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.86■□□□□ 0.13
TRIM11Q96F44 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM11Q96F44 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TRIM11Q96F44 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM11Q96F44 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM11Q96F44 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRIM11Q96F44 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM11Q96F44 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM11Q96F44 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TRIM11Q96F44 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM11Q96F44 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM11Q96F44 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
TRIM11Q96F44 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM11Q96F44 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM11Q96F44 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TRIM11Q96F44 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM11Q96F44 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM11Q96F44 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM11Q96F44 PIN1P1-201ENST00000412108 996 ntBASIC15.85■□□□□ 0.13
TRIM11Q96F44 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM11Q96F44 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms