Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ALG1L14P-201ENST00000514230 434 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 IGHV3-60-201ENST00000521678 354 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AP006287.1-201ENST00000533995 653 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 DIO2-206ENST00000555750 1049 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AC139713.2-201ENST00000641328 2723 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AL365181.1-201ENST00000564032 1828 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 ZNF343-202ENST00000358413 771 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AADAC-202ENST00000488869 719 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AC005154.1-223ENST00000584372 547 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 KRT8P38-201ENST00000441370 1430 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 LINC00337-202ENST00000441724 1138 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AL450472.2-201ENST00000603663 1156 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AC121247.1-201ENST00000622888 1232 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AGGF1P1-201ENST00000509500 2073 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AC008014.1-201ENST00000551503 829 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 TTN-AS1-236ENST00000590040 855 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AC138028.4-201ENST00000564984 1845 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 CCDC89-201ENST00000316398 1412 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC073869.2-201ENST00000417338 1026 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 EEF1GP2-201ENST00000509352 1243 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC087203.1-201ENST00000532111 1181 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC009812.1-201ENST00000605948 1059 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms