Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.83□□□□□ -0.35
SMIM4Q8WVI0 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.83□□□□□ -0.35
SMIM4Q8WVI0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.83□□□□□ -0.35
SMIM4Q8WVI0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SMIM4Q8WVI0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SMIM4Q8WVI0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SMIM4Q8WVI0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.83□□□□□ -0.35
SMIM4Q8WVI0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 AL353705.2-201ENST00000428243 662 ntBASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 IGHV3-22-201ENST00000520721 359 ntBASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 BANF1P1-201ENST00000553684 263 ntBASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 KRT8P23-201ENST00000560090 1207 ntBASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 LINC01225-203ENST00000563550 1244 ntBASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 AC064836.3-201ENST00000607928 673 ntBASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 AC116407.3-201ENST00000623905 1129 ntBASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 MYADML-201ENST00000474610 2147 ntBASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 AL121723.1-201ENST00000445194 1519 ntBASIC12.83□□□□□ -0.36
SMIM4Q8WVI0 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 SPCS2P4-201ENST00000436160 681 ntBASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms