Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
APLFQ8IW19 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 TTTY23B-201ENST00000442790 549 ntBASIC14.99□□□□□ -0.01
APLFQ8IW19 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.99□□□□□ -0.01
APLFQ8IW19 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.99□□□□□ -0.01
APLFQ8IW19 AC123567.1-201ENST00000548294 1261 ntBASIC14.99□□□□□ -0.01
APLFQ8IW19 AC023310.3-201ENST00000557027 670 ntBASIC14.99□□□□□ -0.01
APLFQ8IW19 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.99□□□□□ -0.01
APLFQ8IW19 AC100756.1-201ENST00000562736 682 ntBASIC14.99□□□□□ -0.01
APLFQ8IW19 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.99□□□□□ -0.01
APLFQ8IW19 AC138749.3-201ENST00000567691 622 ntBASIC14.99□□□□□ -0.01
APLFQ8IW19 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.99□□□□□ -0.01
APLFQ8IW19 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.99□□□□□ -0.01
APLFQ8IW19 AC116165.1-201ENST00000611806 668 ntBASIC14.99□□□□□ -0.01
APLFQ8IW19 AL109936.8-201ENST00000641772 604 ntBASIC14.99□□□□□ -0.01
APLFQ8IW19 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
APLFQ8IW19 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
APLFQ8IW19 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
APLFQ8IW19 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.99□□□□□ -0.01
APLFQ8IW19 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.99□□□□□ -0.01
APLFQ8IW19 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
APLFQ8IW19 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.99□□□□□ -0.01
APLFQ8IW19 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
APLFQ8IW19 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APLFQ8IW19 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.99□□□□□ -0.01
APLFQ8IW19 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
APLFQ8IW19 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
APLFQ8IW19 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
APLFQ8IW19 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.98□□□□□ -0.01
APLFQ8IW19 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
APLFQ8IW19 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.98□□□□□ -0.01
APLFQ8IW19 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.98□□□□□ -0.01
APLFQ8IW19 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.98□□□□□ -0.01
APLFQ8IW19 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.98□□□□□ -0.01
APLFQ8IW19 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.98□□□□□ -0.01
APLFQ8IW19 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.98□□□□□ -0.01
APLFQ8IW19 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.98□□□□□ -0.01
APLFQ8IW19 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.98□□□□□ -0.01
APLFQ8IW19 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.98□□□□□ -0.01
APLFQ8IW19 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.98□□□□□ -0.01
APLFQ8IW19 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.98□□□□□ -0.01
APLFQ8IW19 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
APLFQ8IW19 AC152010.1-201ENST00000415779 2006 ntBASIC14.98□□□□□ -0.01
APLFQ8IW19 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.98□□□□□ -0.01
APLFQ8IW19 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APLFQ8IW19 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.98□□□□□ -0.01
APLFQ8IW19 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
APLFQ8IW19 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
APLFQ8IW19 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
APLFQ8IW19 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APLFQ8IW19 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APLFQ8IW19 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
APLFQ8IW19 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APLFQ8IW19 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APLFQ8IW19 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.97□□□□□ -0.01
APLFQ8IW19 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.97□□□□□ -0.01
APLFQ8IW19 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
APLFQ8IW19 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APLFQ8IW19 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
APLFQ8IW19 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
APLFQ8IW19 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APLFQ8IW19 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms