Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 AC003102.2-201ENST00000589195 1469 ntBASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 RN7SKP214-201ENST00000364208 315 ntBASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 RCC2P8-201ENST00000502779 1035 ntBASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 RTN3P1-201ENST00000536295 711 ntBASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 COX6A1P2-201ENST00000620597 330 ntBASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 AC006453.1-201ENST00000636037 1257 ntBASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 AL008718.2-201ENST00000609206 1313 ntBASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 NOC2LP1-201ENST00000450578 752 ntBASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 CEP164P1-201ENST00000455142 418 ntBASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 AC104784.1-201ENST00000473096 294 ntBASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 AC103988.2-201ENST00000561804 725 ntBASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 SNORD3B-2-202ENST00000571722 791 ntBASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 RN7SL555P-201ENST00000584742 339 ntBASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 AC008805.1-201ENST00000590892 364 ntBASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 AC067930.6-201ENST00000623257 4947 ntBASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC149Q6ZUS6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms