Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 AL136172.1-201ENST00000598590 1394 ntBASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC27A1Q6PCB7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 AL008707.1-201ENST00000422498 534 ntBASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 AP000346.4-201ENST00000614827 381 ntBASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 AC067930.6-201ENST00000623257 4947 ntBASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC27A1Q6PCB7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC27A1Q6PCB7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC27A1Q6PCB7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SLC27A1Q6PCB7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC27A1Q6PCB7 NFIC-211ENST00000641145 8399 ntBASIC16.08■□□□□ 0.17
SLC27A1Q6PCB7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SLC27A1Q6PCB7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
SLC27A1Q6PCB7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC27A1Q6PCB7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 AL157407.1-201ENST00000435784 904 ntBASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 AC011742.3-201ENST00000439053 820 ntBASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 MARK2P5-201ENST00000507649 634 ntBASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 AC104640.1-201ENST00000562617 2109 ntBASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 AL645939.5-201ENST00000606834 243 ntBASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 AJ011931.1-201ENST00000618749 2492 ntBASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC27A1Q6PCB7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms