Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CD47Q08722 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.99□□□□□ -0.17
CD47Q08722 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CD47Q08722 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CD47Q08722 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.99□□□□□ -0.17
CD47Q08722 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CD47Q08722 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CD47Q08722 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.99□□□□□ -0.17
CD47Q08722 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.99□□□□□ -0.17
CD47Q08722 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.99□□□□□ -0.17
CD47Q08722 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.99□□□□□ -0.17
CD47Q08722 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CD47Q08722 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CD47Q08722 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.99□□□□□ -0.17
CD47Q08722 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 AL354702.1-201ENST00000442006 1960 ntBASIC13.98□□□□□ -0.17
CD47Q08722 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.98□□□□□ -0.17
CD47Q08722 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.98□□□□□ -0.17
CD47Q08722 KRT8P24-201ENST00000560290 1559 ntBASIC13.98□□□□□ -0.17
CD47Q08722 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 AL139400.1-201ENST00000366220 510 ntBASIC13.98□□□□□ -0.17
CD47Q08722 AC104457.1-201ENST00000401024 814 ntBASIC13.98□□□□□ -0.17
CD47Q08722 TARDBPP1-201ENST00000442013 1203 ntBASIC13.98□□□□□ -0.17
CD47Q08722 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.98□□□□□ -0.17
CD47Q08722 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.98□□□□□ -0.17
CD47Q08722 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 AC022447.6-201ENST00000515522 438 ntBASIC13.98□□□□□ -0.17
CD47Q08722 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.98□□□□□ -0.17
CD47Q08722 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.98□□□□□ -0.17
CD47Q08722 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.98□□□□□ -0.17
CD47Q08722 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.98□□□□□ -0.17
CD47Q08722 SPDYE12P-201ENST00000618416 771 ntBASIC13.98□□□□□ -0.17
CD47Q08722 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 AL033527.5-202ENST00000641632 1098 ntBASIC13.98□□□□□ -0.17
CD47Q08722 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.98□□□□□ -0.17
CD47Q08722 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.98□□□□□ -0.17
CD47Q08722 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CD47Q08722 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
CD47Q08722 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD47Q08722 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.98□□□□□ -0.17
CD47Q08722 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.98□□□□□ -0.17
CD47Q08722 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.97□□□□□ -0.17
CD47Q08722 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD47Q08722 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD47Q08722 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.97□□□□□ -0.17
CD47Q08722 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CD47Q08722 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD47Q08722 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 698.1 ms