Protein–RNA interactions for Protein: P61221

ABCE1, ATP-binding cassette sub-family E member 1, humanhuman

Known RBP Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1P61221 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.8□□□□□ -0.04
ABCE1P61221 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCE1P61221 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCE1P61221 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
ABCE1P61221 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCE1P61221 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCE1P61221 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCE1P61221 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.79□□□□□ -0.04
ABCE1P61221 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ABCE1P61221 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.79□□□□□ -0.04
ABCE1P61221 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.79□□□□□ -0.04
ABCE1P61221 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.79□□□□□ -0.04
ABCE1P61221 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.79□□□□□ -0.04
ABCE1P61221 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.79□□□□□ -0.04
ABCE1P61221 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.79□□□□□ -0.04
ABCE1P61221 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.79□□□□□ -0.04
ABCE1P61221 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.79□□□□□ -0.04
ABCE1P61221 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
ABCE1P61221 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.79□□□□□ -0.04
ABCE1P61221 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.79□□□□□ -0.04
ABCE1P61221 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ABCE1P61221 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.79□□□□□ -0.04
ABCE1P61221 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.79□□□□□ -0.04
ABCE1P61221 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.79□□□□□ -0.04
ABCE1P61221 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.79□□□□□ -0.04
ABCE1P61221 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 SPDYE12P-201ENST00000618416 771 ntBASIC14.79□□□□□ -0.04
ABCE1P61221 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.79□□□□□ -0.04
ABCE1P61221 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.79□□□□□ -0.04
ABCE1P61221 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.79□□□□□ -0.04
ABCE1P61221 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.79□□□□□ -0.04
ABCE1P61221 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.79□□□□□ -0.04
ABCE1P61221 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCE1P61221 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.79□□□□□ -0.04
ABCE1P61221 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ABCE1P61221 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCE1P61221 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCE1P61221 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCE1P61221 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCE1P61221 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCE1P61221 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ABCE1P61221 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCE1P61221 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ABCE1P61221 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCE1P61221 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 AC093525.8-201ENST00000624099 1342 ntBASIC14.78□□□□□ -0.04
ABCE1P61221 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ABCE1P61221 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCE1P61221 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ABCE1P61221 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.78□□□□□ -0.04
ABCE1P61221 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCE1P61221 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.78□□□□□ -0.04
ABCE1P61221 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.78□□□□□ -0.04
ABCE1P61221 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCE1P61221 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCE1P61221 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.78□□□□□ -0.04
ABCE1P61221 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCE1P61221 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCE1P61221 AL121894.2-201ENST00000602977 491 ntBASIC14.78□□□□□ -0.04
ABCE1P61221 AL138828.2-201ENST00000615812 383 ntBASIC14.78□□□□□ -0.04
ABCE1P61221 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
ABCE1P61221 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms