Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP4BP1P59074 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.21■□□□□ 0.34
CHMP4BP1P59074 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.21■□□□□ 0.34
CHMP4BP1P59074 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 TPM3P8-201ENST00000330554 643 ntBASIC17.2■□□□□ 0.34
CHMP4BP1P59074 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 ZNF767P-206ENST00000513792 565 ntBASIC17.2■□□□□ 0.34
CHMP4BP1P59074 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 RNA5SP486-201ENST00000515961 83 ntBASIC17.2■□□□□ 0.34
CHMP4BP1P59074 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 AC232323.1-201ENST00000540724 2099 ntBASIC17.2■□□□□ 0.34
CHMP4BP1P59074 REXO1L5P-201ENST00000622260 2098 ntBASIC17.2■□□□□ 0.34
CHMP4BP1P59074 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 AL138709.1-201ENST00000614840 1693 ntBASIC17.2■□□□□ 0.34
CHMP4BP1P59074 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP4BP1P59074 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 AC092127.1-201ENST00000567093 3455 ntBASIC17.19■□□□□ 0.34
CHMP4BP1P59074 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 AC105250.1-201ENST00000509378 2057 ntBASIC17.19■□□□□ 0.34
CHMP4BP1P59074 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 AC112693.3-201ENST00000624819 1983 ntBASIC17.19■□□□□ 0.34
CHMP4BP1P59074 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 AC006001.1-201ENST00000325130 474 ntBASIC17.19■□□□□ 0.34
CHMP4BP1P59074 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 AP001258.2-201ENST00000529891 490 ntBASIC17.19■□□□□ 0.34
CHMP4BP1P59074 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms