Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SMSP52788 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.14□□□□□ -0.15
SMSP52788 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.14□□□□□ -0.15
SMSP52788 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.14□□□□□ -0.15
SMSP52788 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.13□□□□□ -0.15
SMSP52788 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
SMSP52788 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SMSP52788 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 INTS4P1-203ENST00000641008 3683 ntBASIC14.13□□□□□ -0.15
SMSP52788 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SMSP52788 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.13□□□□□ -0.15
SMSP52788 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.13□□□□□ -0.15
SMSP52788 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.13□□□□□ -0.15
SMSP52788 ENPP7P5-201ENST00000541031 1031 ntBASIC14.13□□□□□ -0.15
SMSP52788 PTP4A1P2-201ENST00000546033 454 ntBASIC14.13□□□□□ -0.15
SMSP52788 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.13□□□□□ -0.15
SMSP52788 AL606495.2-201ENST00000605867 535 ntBASIC14.13□□□□□ -0.15
SMSP52788 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SMSP52788 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.13□□□□□ -0.15
SMSP52788 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMSP52788 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SMSP52788 C8orf49-201ENST00000525043 1968 ntBASIC14.13□□□□□ -0.15
SMSP52788 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.12□□□□□ -0.15
SMSP52788 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.12□□□□□ -0.15
SMSP52788 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SMSP52788 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SMSP52788 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SMSP52788 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SMSP52788 PTENP1-202ENST00000532280 3996 ntBASIC14.12□□□□□ -0.15
SMSP52788 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SMSP52788 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
SMSP52788 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SMSP52788 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 PDIA3P1-201ENST00000471856 1510 ntBASIC14.12□□□□□ -0.15
SMSP52788 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SMSP52788 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 ST20-AS1-201ENST00000560255 4223 ntBASIC14.12□□□□□ -0.15
SMSP52788 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 GHSR-202ENST00000427970 912 ntBASIC14.12□□□□□ -0.15
SMSP52788 HIST3H2BA-201ENST00000436555 524 ntBASIC14.12□□□□□ -0.15
SMSP52788 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMSP52788 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.12□□□□□ -0.15
SMSP52788 AL355994.2-201ENST00000447882 704 ntBASIC14.12□□□□□ -0.15
SMSP52788 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.12□□□□□ -0.15
SMSP52788 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.12□□□□□ -0.15
SMSP52788 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.12□□□□□ -0.15
SMSP52788 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.12□□□□□ -0.15
SMSP52788 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.12□□□□□ -0.15
SMSP52788 MIR4538-201ENST00000581377 78 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms